USP9YP4

Across TCGA patient cohorts, USP9YP4 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,240 significant associations in total. STAD shows the largest number of these associations.

The most reproducible USP9YP4-associated GO terms across cancer lineages are Double-strand break repair via nonhomologous end joining, Neural nucleus development, and Protein folding. Each is linked with USP9YP4 in more than 4 cancer types. Because this analysis shows association rather than direction, both USP9YP4-to-partner and partner-to-USP9YP4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Double-strand break repair via nonhomologous end joining grouped by USP9YP4-low versus USP9YP4-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (USP9YP4→partner) and Y-score (partner→USP9YP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Double-strand break repair via nonhomologous end joining →	+0.098	+0.012	<.001	.001	3	5
ESCA	Neural nucleus development →	+0.080	+0.012	<.001	.001	3	4
ESCA	Protein folding →	+0.107	+0.012	<.001	<.001	3	4
ESCA	Mesoderm development →	+0.074	+0.013	<.001	<.001	3	4
ESCA	Neural tube development →	+0.098	+0.018	<.001	<.001	3	4
ESCA	Midbrain development →	+0.093	+0.012	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,240 associations by consensus.

Double-strand break repair via nonhomologous end joining by USP9YP4 expression — ESCA

Explore this box plot interactively →