USP50

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, USP50 mutation is significantly associated with the total protein of many other genes, with 42 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible USP50-associated genes across cancer lineages are Caspase-7-cleavedD198, C-Raf, and A-Raf_pS299. Each is linked with USP50 in more than 1 cancer types. Because this analysis shows association rather than direction, both USP50-to-partner and partner-to-USP50 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by USP50-low versus USP50-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (USP50→partner) and Y-score (partner→USP50) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.531+2.000.047.03232
UCECC-Raf →+0.275+2.000<.001.03032
UCECA-Raf_pS299 →-0.184-3.000<.001.03631
UCECFASN →+0.592+3.807<.001<.00122
UCECFoxM1 →+0.442+3.807<.001<.00131
UCECFOXO3a_pS318_S321 →-0.129-3.449.021.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 42 associations by consensus.

Caspase-7-cleavedD198 by USP50 expression — UCEC

Box plot of Caspase-7-cleavedD198 in USP50-low vs USP50-high samples in UCEC.

Explore this box plot interactively →

Exploration