USP47

Across TCGA pan-cancer cohorts, USP47 mass-spec protein differs between tumor and matched normal tissue in 5 of 18 cancer types tested, making tumor–normal expression one of USP47’s most consistent transcriptional readouts.

The strongest signal is observed in pancreatic ductal adenocarcinoma (PDAC), where USP47 mass-spec protein is repressed in tumor relative to normal tissue. In most cancer types USP47 is over-expressed in tumor, although a few such as PDAC and HNSC show the opposite, repressed pattern.

PDAC, HNSC, and CCRCC are the cancer types where USP47 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in USP47 mass-spec protein (log₂); positive values indicate higher expression in tumor. p-values are from the differential-expression test.

Lineage	Gender	Stage	Fold-change	p	Sampling consensus
PDAC	Female	All	−0.283	<.001	8	view →
HNSC	Male	All	−0.129	<.001	8	view →
CCRCC	Female	All	+0.103	<.001	8	view →
LSCC	All	II,III,IV	−0.137	<.001	6	view →
LUAD	Male	All	−0.104	<.001	4	view →

Pink = over-expressed in tumor, green = repressed in tumor. Showing the 5 strongest of 5 lineages.

USP47–PDAC

Open the PDAC breakdown →