USP40

Across TCGA patient cohorts, USP40 RNA expression is significantly associated with the RNA expression of many other genes, with 19,962 significant associations in total. UVM shows the largest number of these associations.

The most reproducible USP40-associated genes across cancer lineages are BECN1, PRRC2B, and TRIP12. Each is linked with USP40 in more than 33 cancer types. Because this analysis shows association rather than direction, both USP40-to-partner and partner-to-USP40 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, USP40 versus BECN1 in THYM, with a Pearson correlation of 0.46.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (USP40→partner) and Y-score (partner→USP40) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
THYM	BECN1 →	+1.234	+0.624	<.001	<.001	3	34
ACC	PRRC2B →	+1.598	+1.064	<.001	<.001	3	34
ACC	TRIP12 →	+1.180	+0.886	<.001	<.001	3	34
UVM	FKTN →	+1.049	+0.840	<.001	<.001	3	33
SCLC	ZNF142 →	+0.891	+0.804	<.001	<.001	3	33
ACC	HDLBP →	+1.194	+0.822	<.001	<.001	3	33

Each partner links to its Q-omics profile. Showing the 6 strongest of 19,962 associations by consensus.

USP40 vs BECN1 — THYM

Explore this scatter interactively →