USP34

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, USP34 protein abundance is significantly associated with the RNA expression of many other genes, with 10,872 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible USP34-associated genes across cancer lineages are CCT4, NOL10, and DTYMK. Each is linked with USP34 in more than 6 cancer types. Because this analysis shows association rather than direction, both USP34-to-partner and partner-to-USP34 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, USP34 versus CCT4 in LSCC, with a Pearson correlation of 0.57.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (USP34→partner) and Y-score (partner→USP34) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCCT4 →+0.611+0.209<.001<.00137
HNSCNOL10 →+0.839+0.241<.001<.00137
HNSCDTYMK →+1.059+0.192<.001<.00137
HNSCCPSF3 →+0.901+0.200<.001<.00137
UCECKIF23 →+1.036+0.176<.001<.00137
UCECCDCA5 →+1.125+0.156<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,872 associations by consensus.

USP34 vs CCT4 — LSCC

Per-sample scatter of USP34 vs CCT4 in LSCC (Pearson r = 0.57).

Explore this scatter interactively →

Exploration