USP20

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, USP20 protein abundance is significantly associated with the RNA expression of many other genes, with 2,947 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible USP20-associated genes across cancer lineages are ACSL3-AS1, PGAM5, and ALDH8A1. Each is linked with USP20 in more than 1 cancer types. Because this analysis shows association rather than direction, both USP20-to-partner and partner-to-USP20 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, USP20 versus ACSL3-AS1 in OV, with a Pearson correlation of -0.52.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (USP20→partner) and Y-score (partner→USP20) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVACSL3-AS1 →-0.413-0.619.003.00132
OVPGAM5 →+0.501+0.586.003.00132
LSCCALDH8A1 →-1.312-0.233.003<.00132
GBMPIP4K2C →+0.569+0.124.006.00232
GBMSLC29A3 →+0.346+0.141.005<.00132
LSCCTMCC2-AS1 →-0.462-0.202<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,947 associations by consensus.

USP20 vs ACSL3-AS1 — OV

Per-sample scatter of USP20 vs ACSL3-AS1 in OV (Pearson r = -0.52).

Explore this scatter interactively →

Exploration