USP17L13

Across TCGA cell cohorts, USP17L13 RNA expression is significantly associated with the mutation status of many other genes, with 168 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible USP17L13-associated genes across cancer lineages are PCDHB6, VPS9D1, and MCF2. Each is linked with USP17L13 in more than 1 cancer types. Because this analysis shows association rather than direction, both USP17L13-to-partner and partner-to-USP17L13 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PCDHB6 grouped by USP17L13-low versus USP17L13-high in BLOOD_Leukemia.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (USP17L13→partner) and Y-score (partner→USP17L13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLOOD_Leukemia	PCDHB6 →	+2.969	+0.002	.003	<.001	3	2
LUNG_SCLC	VPS9D1 →	+5.029	+0.013	.006	<.001	3	1
LUNG_SCLC	MCF2 →	+3.029	+0.005	.003	<.001	3	1
LUNG_SCLC	TTC23 →	+5.029	+0.013	.006	<.001	3	1
LUNG_SCLC	PRSS16 →	+3.614	+0.007	.001	<.001	3	1
LUNG_SCLC	BMP15 →	+5.029	+0.013	.006	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 168 associations by consensus.

PCDHB6 by USP17L13 expression — BLOOD_Leukemia

Explore this box plot interactively →