USP17L10

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, USP17L10 protein abundance is significantly associated with the RNA expression of many other genes, with 24 significant associations in total. GBM shows the largest number of these associations.

The most reproducible USP17L10-associated genes across cancer lineages are PDGFRA, AGRP, and SPRYD4. Each is linked with USP17L10 in more than 1 cancer types. Because this analysis shows association rather than direction, both USP17L10-to-partner and partner-to-USP17L10 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, USP17L10 versus PDGFRA in GBM, with a Pearson correlation of -0.60.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (USP17L10→partner) and Y-score (partner→USP17L10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPDGFRA →-0.996-2.126.001.00931
GBMAGRP →-0.870-2.804<.001.00831
GBMSPRYD4 →-0.599-2.804.002.00831
GBMABCA4 →+0.396+2.116.001.00931
GBMLINC01343 →+0.183+2.923.004.00431
GBMFOXD1 →-1.493-2.530.005<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 24 associations by consensus.

USP17L10 vs PDGFRA — GBM

Per-sample scatter of USP17L10 vs PDGFRA in GBM (Pearson r = -0.60).

Explore this scatter interactively →

Exploration