USF1

Across TCGA cell cohorts, USF1 protein abundance is significantly associated with the RNA expression of many other genes, with 4,639 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible USF1-associated genes across cancer lineages are VAMP3, CARF, and SRR. Each is linked with USF1 in more than 3 cancer types. Because this analysis shows association rather than direction, both USF1-to-partner and partner-to-USF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, USF1 versus VAMP3 in CNS, with a Pearson correlation of 0.50.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (USF1→partner) and Y-score (partner→USF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CNS	VAMP3 →	+0.663	+1.501	.002	.006	3	4
LUNG_NSCLC_LUAD	CARF →	+0.734	+1.089	.001	.007	3	4
BREAST	SRR →	+1.594	+1.073	.008	.001	3	3
CNS	EIF4G2 →	+0.364	+1.109	.004	.004	3	3
CNS	SYNJ1 →	+0.655	+1.048	.004	.007	3	3
CNS	GNG12 →	+1.760	+1.615	.005	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,639 associations by consensus.

USF1 vs VAMP3 — CNS

Explore this scatter interactively →