UNK

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, UNK mass-spec protein is linked to patient survival in 4 of 34 cancer types, making it a survival-associated UNK data layer compared with 23 for mass-spec protein and 3 for mutation status.

The strongest signal is observed in lung squamous cell carcinoma (LSCC), where higher UNK mass-spec protein is associated with better overall survival. In most high-consensus cancer types, elevated UNK expression acts as an unfavorable survival marker, although some lineages such as LSCC and PDAC show a favorable association.

LSCC, CCRCC, and PDAC are the cancer types where UNK mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
LSCCOSQuartileAll0.9610.794.0315view →
CCRCCDFSMedianAll0.7420.866.0442view →
PDACOSMedianII,III,IV0.9400.723.0192view →
LUADDFSQuartileAll1.0000.666.0212view →
Pink = unfavorable, green = favorable. Showing the 4 strongest of 4 lineages.

UNK–LSCC (OS)

Kaplan–Meier survival curve for UNK mass-spec protein-high vs -low samples in LSCC.

Open the LSCC breakdown →

Exploration