UNK

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, UNK protein abundance is significantly associated with the RNA expression of many other genes, with 15,541 significant associations in total. GBM shows the largest number of these associations.

The most reproducible UNK-associated genes across cancer lineages are C17orf80, PPM1D, and VASP. Each is linked with UNK in more than 5 cancer types. Because this analysis shows association rather than direction, both UNK-to-partner and partner-to-UNK results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, UNK versus C17orf80 in BRCA, with a Pearson correlation of 0.53.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (UNK→partner) and Y-score (partner→UNK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAC17orf80 →+0.499+0.317<.001<.00136
BRCAPPM1D →+0.614+0.270<.001<.00136
GBMVASP →-0.587-0.275<.001<.00135
OVNOL11 →+0.528+0.289.002<.00135
GBMS100A11 →-0.814-0.250<.001<.00135
HNSCAMZ2P1 →+0.596+0.188<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,541 associations by consensus.

UNK vs C17orf80 — BRCA

Per-sample scatter of UNK vs C17orf80 in BRCA (Pearson r = 0.53).

Explore this scatter interactively →

Exploration