UBXN4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, UBXN4 protein abundance is significantly associated with the RNA expression of many other genes, with 10,592 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible UBXN4-associated genes across cancer lineages are PECR, GCNT2, and BAZ2B. Each is linked with UBXN4 in more than 3 cancer types. Because this analysis shows association rather than direction, both UBXN4-to-partner and partner-to-UBXN4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, UBXN4 versus PECR in OV, with a Pearson correlation of 0.28.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (UBXN4→partner) and Y-score (partner→UBXN4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVPECR →+0.554+0.245.006.00734
LSCCGCNT2 →+0.949+0.191<.001<.00134
LSCCBAZ2B →+0.416+0.182.001.00334
HNSCSAP130 →+0.395+0.146<.001<.00134
HNSCRAB11B →+0.647+0.175.001.00134
LSCCTFDP2 →+0.633+0.212<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,592 associations by consensus.

UBXN4 vs PECR — OV

Per-sample scatter of UBXN4 vs PECR in OV (Pearson r = 0.28).

Explore this scatter interactively →

Exploration