UBXN4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, UBXN4 mutation is significantly associated with the total protein of many other genes, with 19 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible UBXN4-associated genes across cancer lineages are ATM, GAPDH, and INPP4B. Each is linked with UBXN4 in more than 2 cancer types. Because this analysis shows association rather than direction, both UBXN4-to-partner and partner-to-UBXN4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by UBXN4-low versus UBXN4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (UBXN4→partner) and Y-score (partner→UBXN4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECATM →-0.592-3.169.003.01933
UCECGAPDH →+0.517+2.999.032.03532
UCECINPP4B →-0.329-2.321.024.03432
UCECGab2 →+0.331+2.000.039.03231
UCECMEK1 →+0.496+3.321.002.01031
UCECp62 Lck ligand →+0.384+3.331.008.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 19 associations by consensus.

ATM by UBXN4 expression — UCEC

Box plot of ATM in UBXN4-low vs UBXN4-high samples in UCEC.

Explore this box plot interactively →

Exploration