UBE4B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, UBE4B mutation is significantly associated with the RNA expression of many other genes, with 90 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible UBE4B-associated genes across cancer lineages are GJA10, GZMK, and FFAR3. Each is linked with UBE4B in more than 2 cancer types. Because this analysis shows association rather than direction, both UBE4B-to-partner and partner-to-UBE4B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GJA10 grouped by UBE4B-low versus UBE4B-high in PANCREAS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (UBE4B→partner) and Y-score (partner→UBE4B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASGJA10 →+0.263+4.786<.001.00133
PANCREASGZMK →+0.005+4.614<.001.00431
PANCREASFFAR3 →+0.028+4.237.009.00631
PANCREASNCR1 →+0.029+4.786<.001.00131
PANCREASTP53TG3B →+0.322+4.011<.001.00931
OESOPHAGUSOR2M3 →+0.006+4.906<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 90 associations by consensus.

GJA10 by UBE4B expression — PANCREAS

Box plot of GJA10 in UBE4B-low vs UBE4B-high samples in PANCREAS.

Explore this box plot interactively →

Exploration