UBD

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, UBD RNA expression is significantly associated with the protein abundance of many other proteins, with 8,536 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible UBD-associated proteins across cancer lineages are GBP4, STAT1, and PSMB10. Each is linked with UBD in more than 7 cancer types. Because this analysis shows association rather than direction, both UBD-to-partner and partner-to-UBD results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (UBD→partner) and Y-score (partner→UBD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCGBP4 →+0.648+0.138<.001<.00138
CCRCCSTAT1 →+0.656+0.325<.001<.00137
HNSCPSMB10 →+0.451+0.174<.001.00137
BRCAPSMB9 →+0.403+0.151<.001<.00137
HNSCCD74 →+0.677+0.260<.001<.00136
HNSCGBP1 →+0.870+0.168<.001.00436
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,536 associations by consensus.

Exploration