UBD

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, UBD protein abundance is significantly associated with the RNA expression of many other genes, with 3,318 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible UBD-associated genes across cancer lineages are NSMCE1, DALRD3, and OR2I1P. Each is linked with UBD in more than 2 cancer types. Because this analysis shows association rather than direction, both UBD-to-partner and partner-to-UBD results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (UBD→partner) and Y-score (partner→UBD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCANSMCE1 →-1.075-1.097<.001<.00133
BRCADALRD3 →-1.070-1.215<.001<.00133
BRCAOR2I1P →+2.493+1.142<.001.00233
BRCASEC22C →-0.430-0.679<.001.00233
BRCAPXMP4 →-1.284-0.863.002.00532
BRCABLVRA →-0.905-0.779<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,318 associations by consensus.

Exploration