UBD

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, UBD RNA expression is significantly associated with the go_rna of many other GO terms, with 2,531 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible UBD-associated GO terms across cancer lineages are Spermatid differentiation, Antigen processing and presentation of peptide antigen via MHC class I, and Regulation of type III interferon production. Each is linked with UBD in more than 11 cancer types. Because this analysis shows association rather than direction, both UBD-to-partner and partner-to-UBD results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (UBD→partner) and Y-score (partner→UBD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASSpermatid differentiation →-0.025-1.921<.001.002312
BREASTAntigen processing and presentation of peptide antigen via MHC class I →+0.163+1.268.004.006212
BREASTRegulation of type III interferon production →+1.104+1.239<.001.005311
LIVERBasement membrane disassembly →+1.549+4.143<.001<.001212
URINARY_TRACTCellular response to tumor necrosis factor →+0.088+2.444.003.009311
LARGE_INTESTINESpermatid development →-0.027-2.015<.001.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,531 associations by consensus.

Exploration