UBAP1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, UBAP1 mutation is significantly associated with the total protein of many other genes, with 18 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible UBAP1-associated genes across cancer lineages are PCNA, 14-3-3_beta, and EGFR_pY1068. Each is linked with UBAP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both UBAP1-to-partner and partner-to-UBAP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PCNA grouped by UBAP1-low versus UBAP1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (UBAP1→partner) and Y-score (partner→UBAP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPCNA →+0.211+2.000.012.01032
UCEC14-3-3_beta →-0.107-2.095.006.01731
UCECEGFR_pY1068 →-0.224-2.584.022.01031
UCECACC_pS79 →+0.377+3.321.005.00931
UCECACC1 →+0.413+2.335.003.01831
UCECJNK_pT183_Y185 →-0.134-2.115.043.01731
Each partner links to its Q-omics profile. Showing the 6 strongest of 18 associations by consensus.

PCNA by UBAP1 expression — UCEC

Box plot of PCNA in UBAP1-low vs UBAP1-high samples in UCEC.

Explore this box plot interactively →

Exploration