UBA6

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, UBA6 mutation is significantly associated with the RNA expression of many other genes, with 5,827 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible UBA6-associated genes across cancer lineages are PCCB, UBAC1, and SKA1. Each is linked with UBA6 in more than 2 cancer types. Because this analysis shows association rather than direction, both UBA6-to-partner and partner-to-UBA6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PCCB grouped by UBA6-low versus UBA6-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (UBA6→partner) and Y-score (partner→UBA6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADPCCB →+0.414+3.205.005.00933
LUADUBAC1 →+0.322+3.366.006.00433
LUADSKA1 →+0.838+2.257.002.00633
UCECSAAL1 →+0.525+1.530<.001<.00133
LUADTUBA1C →+0.557+2.234.003.00633
LUADKPNA2 →+0.840+2.906<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,827 associations by consensus.

PCCB by UBA6 expression — LUAD

Box plot of PCCB in UBA6-low vs UBA6-high samples in LUAD.

Explore this box plot interactively →

Exploration