TUBA3D

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TUBA3D protein abundance is significantly associated with the RNA expression of many other genes, with 11 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TUBA3D-associated genes across cancer lineages are CCDC63, RNU6-61P, and MRPL35P4. Each is linked with TUBA3D in more than 1 cancer types. Because this analysis shows association rather than direction, both TUBA3D-to-partner and partner-to-TUBA3D results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TUBA3D versus CCDC63 in UCEC, with a Pearson correlation of -0.85.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TUBA3D→partner) and Y-score (partner→TUBA3D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCCDC63 →-0.083-0.908.002.00831
UCECRNU6-61P →-1.726-0.908<.001.00831
UCECMRPL35P4 →-0.436-0.908.009.00831
UCECLINC01880 →-0.166-0.908<.001.00831
UCECHCRT →-0.246-0.908.003.00821
UCECOR56B3P →-0.180-0.908.007.00821
Each partner links to its Q-omics profile. Showing the 6 strongest of 11 associations by consensus.

TUBA3D vs CCDC63 — UCEC

Per-sample scatter of TUBA3D vs CCDC63 in UCEC (Pearson r = -0.85).

Explore this scatter interactively →

Exploration