TTC4

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TTC4 RNA expression is significantly associated with the RNA expression of many other genes, with 20,428 significant associations in total. ACC shows the largest number of these associations.

The most reproducible TTC4-associated genes across cancer lineages are SOCS7, WDR3, and LRRC40. Each is linked with TTC4 in more than 33 cancer types. Because this analysis shows association rather than direction, both TTC4-to-partner and partner-to-TTC4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TTC4 versus SOCS7 in UCS, with a Pearson correlation of 0.64.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TTC4→partner) and Y-score (partner→TTC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCSSOCS7 →+1.413+0.448<.001.002334
DLBCWDR3 →+1.186+0.679<.001<.001334
DLBCLRRC40 →+1.516+0.632<.001<.001334
UCSZFP69B →+0.867+0.412<.001<.001334
DLBCTASOR2 →+1.461+0.627<.001<.001334
KICHKPNB1 →+1.049+0.453<.001<.001334
Each partner links to its Q-omics profile. Showing the 6 strongest of 20,428 associations by consensus.

TTC4 vs SOCS7 — UCS

Per-sample scatter of TTC4 vs SOCS7 in UCS (Pearson r = 0.64).

Explore this scatter interactively →

Exploration