TTC29

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, TTC29 RNA differs between tumor and matched normal tissue in 9 of 18 cancer types tested, making tumor–normal expression one of TTC29’s most consistent transcriptional readouts.

The strongest signal is observed in thyroid carcinoma (THCA), where TTC29 RNA is repressed in tumor relative to normal tissue. In most cancer types TTC29 is over-expressed in tumor, although a few such as THCA and KIRC show the opposite, repressed pattern.

THCA, KIRC, and LUSC are the cancer types where TTC29 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in TTC29 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
THCAMaleAll−0.325<.0019view →
KIRCAllIII,IV−0.322<.0019view →
LUSCFemaleII,III,IV−1.888<.0018view →
LUADAllII,III,IV−1.316<.0018view →
KICHMaleAll−0.419<.0018view →
COADAllAll+0.406.0413view →
UCECAllAll−1.065.0312view →
PRADAllAll+0.170.0432view →
LIHCFemaleAll+0.018.0211view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 9 strongest of 9 lineages.

TTC29–THCA

Tumor-vs-normal expression box plot for TTC29 RNA in THCA.

Open the THCA breakdown →

Exploration