TSSK3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TSSK3 protein abundance is significantly associated with the RNA expression of many other genes, with 185 significant associations in total. OV shows the largest number of these associations.

The most reproducible TSSK3-associated genes across cancer lineages are LMF2, TTLL12, and MRGBP. Each is linked with TSSK3 in more than 1 cancer types. Because this analysis shows association rather than direction, both TSSK3-to-partner and partner-to-TSSK3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TSSK3 versus LMF2 in OV, with a Pearson correlation of -0.80.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TSSK3→partner) and Y-score (partner→TSSK3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVLMF2 →-1.033-1.751.008.00131
OVTTLL12 →-0.875-1.755.003<.00131
OVMRGBP →+0.828+1.251.006.00631
OVKLC3 →+0.842+1.551.002.00931
OVCBX1 →+1.060+1.837.003<.00131
OVRND2 →+1.313+1.436.002<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 185 associations by consensus.

TSSK3 vs LMF2 — OV

Per-sample scatter of TSSK3 vs LMF2 in OV (Pearson r = -0.80).

Explore this scatter interactively →

Exploration