TSSC4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TSSC4 mutation is significantly associated with the total protein of many other genes, with 14 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TSSC4-associated genes across cancer lineages are 14-3-3_beta, EGFR_pY1068, and p62 Lck ligand. Each is linked with TSSC4 in more than 1 cancer types. Because this analysis shows association rather than direction, both TSSC4-to-partner and partner-to-TSSC4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TSSC4→partner) and Y-score (partner→TSSC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCEC14-3-3_beta →-0.116-2.979.035.03631
UCECEGFR_pY1068 →-0.445-3.169.001.02031
UCECp62 Lck ligand →+0.475+3.179.007.01031
UCECAnnexin-1 →+0.741+2.827.010.03531
UCECAR →-0.481-3.169.019.02031
UCECATM →-0.524-3.169.035.02031
Each partner links to its Q-omics profile. Showing the 6 strongest of 14 associations by consensus.

Exploration