TSPAN4

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TSPAN4 mutation is significantly associated with the mutation status of many other genes, with 486 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible TSPAN4-associated genes across cancer lineages are TMEM145, ZNF878, and ANKRD34A. Each is linked with TSPAN4 in more than 2 cancer types. Because this analysis shows association rather than direction, both TSPAN4-to-partner and partner-to-TSPAN4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TSPAN4→partner) and Y-score (partner→TSPAN4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaTMEM145 →+5.321+5.894.002.00213
BLOOD_LeukemiaZNF878 →+5.321+5.894.002.00212
BLOOD_LeukemiaANKRD34A →+4.321+5.285.005.00512
BLOOD_LeukemiaAPCDD1 →+4.000+5.050.008.00812
BLOOD_LeukemiaBRAF →+4.321+5.285.005.00512
BLOOD_LeukemiaCHAF1B →+6.321+6.321.001.00112
Each partner links to its Q-omics profile. Showing the 6 strongest of 486 associations by consensus.

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