TSC22D3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TSC22D3 mutation is significantly associated with the total protein of many other genes, with 29 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TSC22D3-associated genes across cancer lineages are ATM, eIF4G, and A-Raf_pS299. Each is linked with TSC22D3 in more than 1 cancer types. Because this analysis shows association rather than direction, both TSC22D3-to-partner and partner-to-TSC22D3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by TSC22D3-low versus TSC22D3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TSC22D3→partner) and Y-score (partner→TSC22D3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECATM →-0.760-2.807<.001.00332
UCECeIF4G →+0.289+2.321.024.03431
UCECA-Raf_pS299 →-0.131-3.169.007.01931
UCECERK2 →+0.217+3.321.006.00931
UCECFoxM1 →+0.216+2.321.043.00631
UCECGATA6 →-0.243-3.570<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 29 associations by consensus.

ATM by TSC22D3 expression — UCEC

Box plot of ATM in TSC22D3-low vs TSC22D3-high samples in UCEC.

Explore this box plot interactively →

Exploration