TSBP1-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, TSBP1-AS1 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of TSBP1-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where TSBP1-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types TSBP1-AS1 is over-expressed in tumor, although a few such as KICH and COAD show the opposite, repressed pattern.

KICH, COAD, and BRCA are the cancer types where TSBP1-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in TSBP1-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KICHAllAll−0.172<.0017view →
COADFemaleII,III,IV−0.034<.0017view →
BRCAAllIII,IV−0.096<.0016view →
UCECAllAll−0.225<.0014view →
HNSCFemaleIII,IV+0.035.0353view →
KIRCAllIV−0.057.0192view →
LUSCAllIII,IV−0.103.0181view →
BLCAFemaleIII,IV−0.045.0121view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

Exploration