TRPM7

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TRPM7 mutation is significantly associated with the total protein of many other genes, with 48 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TRPM7-associated genes across cancer lineages are C-Raf, TFRC, and CD49b. Each is linked with TRPM7 in more than 2 cancer types. Because this analysis shows association rather than direction, both TRPM7-to-partner and partner-to-TRPM7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C-Raf grouped by TRPM7-low versus TRPM7-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRPM7→partner) and Y-score (partner→TRPM7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECC-Raf →+0.112+1.447.005.00233
STADTFRC →+0.771+3.000.017.03623
SKCMCD49b →+0.191+1.502.042.03532
UCECFoxM1 →+0.150+2.044.039<.00132
UCECMEK1 →+0.245+1.716.017.00332
UCECNotch1 →+0.160+1.533<.001.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 48 associations by consensus.

C-Raf by TRPM7 expression — UCEC

Box plot of C-Raf in TRPM7-low vs TRPM7-high samples in UCEC.

Explore this box plot interactively →

Exploration