TRPM6

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TRPM6 mutation is significantly associated with the total protein of many other genes, with 108 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TRPM6-associated genes across cancer lineages are Caspase-7-cleavedD198, Cyclin-E2, and Rictor. Each is linked with TRPM6 in more than 5 cancer types. Because this analysis shows association rather than direction, both TRPM6-to-partner and partner-to-TRPM6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by TRPM6-low versus TRPM6-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRPM6→partner) and Y-score (partner→TRPM6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADCaspase-7-cleavedD198 →+1.374+3.476<.001.00236
COADCyclin-E2 →+0.169+3.321.049.00935
UCECRictor →-0.335-1.142.023.04834
UCECATM →-0.541-1.624<.001<.00134
UCECCaveolin-1 →-0.482-2.415.010.00234
STADeEF2 →+0.503+3.169<.001.01933
Each partner links to its Q-omics profile. Showing the 6 strongest of 108 associations by consensus.

Caspase-7-cleavedD198 by TRPM6 expression — COAD

Box plot of Caspase-7-cleavedD198 in TRPM6-low vs TRPM6-high samples in COAD.

Explore this box plot interactively →

Exploration