TRIM9

Across TCGA cell cohorts, TRIM9 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,788 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible TRIM9-associated GO terms across cancer lineages are Nucleotide-excision repair, Protein polymerization, and Nucleoside triphosphate metabolic process. Each is linked with TRIM9 in more than 9 cancer types. Because this analysis shows association rather than direction, both TRIM9-to-partner and partner-to-TRIM9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nucleotide-excision repair grouped by TRIM9-low versus TRIM9-high in LIVER.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TRIM9→partner) and Y-score (partner→TRIM9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIVER	Nucleotide-excision repair →	+0.061	+1.523	.002	<.001	3	10
BLOOD_Leukemia	Protein polymerization →	+0.066	+1.224	<.001	<.001	3	9
BREAST	Nucleoside triphosphate metabolic process →	+0.058	+1.251	.003	.004	2	10
URINARY_TRACT	Aerobic electron transport chain →	+0.070	+1.613	<.001	<.001	3	9
URINARY_TRACT	ATP synthesis coupled electron transport →	+0.068	+1.402	.003	.006	3	9
URINARY_TRACT	Mitochondrial ATP synthesis coupled electron transport →	+0.068	+1.402	.003	.006	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,788 associations by consensus.

Nucleotide-excision repair by TRIM9 expression — LIVER

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