TRIM47

Across TCGA patient cohorts, TRIM47 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,306 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible TRIM47-associated proteins across cancer lineages are TRIM47_S588, LAMB3, and LAMC2. Each is linked with TRIM47 in more than 4 cancer types. Because this analysis shows association rather than direction, both TRIM47-to-partner and partner-to-TRIM47 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TRIM47 versus TRIM47_S588 in LSCC, with a Pearson correlation of 0.50.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (TRIM47→partner) and Y-score (partner→TRIM47) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	TRIM47_S588 →	+0.666	+0.977	<.001	<.001	3	5
LSCC	LAMB3 →	+0.641	+0.696	<.001	<.001	3	5
LSCC	LAMC2 →	+0.721	+0.709	<.001	<.001	3	5
LUAD	ARHGEF10L →	+0.283	+0.640	<.001	<.001	3	5
LSCC	OAS3 →	+0.545	+0.791	.003	<.001	3	4
BRCA	PLEK2 →	+0.540	+0.876	.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,306 associations by consensus.

TRIM47 vs TRIM47_S588 — LSCC

Explore this scatter interactively →