TRIM47

Across TCGA cell cohorts, TRIM47 RNA expression is significantly associated with the RNA expression of many other genes, with 10,055 significant associations in total. BONE shows the largest number of these associations.

The most reproducible TRIM47-associated genes across cancer lineages are SQSTM1, ITGA3, and MICALL2. Each is linked with TRIM47 in more than 8 cancer types. Because this analysis shows association rather than direction, both TRIM47-to-partner and partner-to-TRIM47 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TRIM47 versus SQSTM1 in BONE, with a Pearson correlation of 0.73.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRIM47→partner) and Y-score (partner→TRIM47) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BONE	SQSTM1 →	+1.857	+2.020	<.001	<.001	3	9
BONE	ITGA3 →	+4.583	+2.201	<.001	<.001	3	8
CNS	MICALL2 →	+1.545	+1.366	.001	.001	2	8
BONE	NLRC5 →	+2.123	+1.493	<.001	<.001	3	7
BONE	PSMB8 →	+3.514	+1.617	<.001	<.001	3	7
BREAST	OSBPL3 →	+1.684	+1.731	.002	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,055 associations by consensus.

TRIM47 vs SQSTM1 — BONE

Explore this scatter interactively →