TRIM47

Across TCGA cell cohorts, TRIM47 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,026 significant associations in total. BONE shows the largest number of these associations.

The most reproducible TRIM47-associated GO terms across cancer lineages are Cytoplasmic pattern recognition receptor signaling pathway, Alpha-amino acid catabolic process, and Amino acid catabolic process. Each is linked with TRIM47 in more than 10 cancer types. Because this analysis shows association rather than direction, both TRIM47-to-partner and partner-to-TRIM47 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cytoplasmic pattern recognition receptor signaling pathway grouped by TRIM47-low versus TRIM47-high in LUNG_NSCLC_LUAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TRIM47→partner) and Y-score (partner→TRIM47) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUAD	Cytoplasmic pattern recognition receptor signaling pathway →	+0.060	+1.237	<.001	<.001	3	11
BONE	Alpha-amino acid catabolic process →	-0.078	-1.546	.001	.004	3	10
OESOPHAGUS	Amino acid catabolic process →	-0.067	-1.347	.001	.001	3	10
BONE	L-amino acid catabolic process →	-0.072	-1.552	.002	.002	3	9
LUNG_NSCLC_LUAD	Negative regulation of cell-cell adhesion →	+0.080	+1.537	<.001	<.001	3	9
LUNG_SCLC	Gland morphogenesis →	+0.191	+1.553	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,026 associations by consensus.

Cytoplasmic pattern recognition receptor signaling pathway by TRIM47 expression — LUNG_NSCLC_LUAD

Explore this box plot interactively →