TRIM4

Across TCGA cell cohorts, TRIM4 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,432 significant associations in total. CNS shows the largest number of these associations.

The most reproducible TRIM4-associated GO terms across cancer lineages are Receptor metabolic process, Cilium movement involved in cell motility, and Receptor recycling. Each is linked with TRIM4 in more than 12 cancer types. Because this analysis shows association rather than direction, both TRIM4-to-partner and partner-to-TRIM4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Receptor metabolic process grouped by TRIM4-low versus TRIM4-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TRIM4→partner) and Y-score (partner→TRIM4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Receptor metabolic process →	+0.055	+0.775	<.001	.006	3	13
UPPER_AERODIGESTIVE_TRACT	Cilium movement involved in cell motility →	-0.094	-0.608	<.001	.001	3	12
STOMACH	Receptor recycling →	+0.072	+0.921	<.001	<.001	3	12
STOMACH	Pre-mRNA catabolic process →	+0.153	+1.125	<.001	.002	3	12
UPPER_AERODIGESTIVE_TRACT	Cilium or flagellum-dependent cell motility →	-0.088	-0.608	<.001	.001	3	11
PANCREAS	Endocytic recycling →	+0.070	+0.912	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,432 associations by consensus.

Receptor metabolic process by TRIM4 expression — STOMACH

Explore this box plot interactively →