Across TCGA cell cohorts, TRIM39 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,612 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible TRIM39-associated GO terms across cancer lineages are Negative regulation of RNA export from nucleus, Vesicle-mediated transport to the plasma membrane, and Establishment of protein localization to organelle. Each is linked with TRIM39 in more than 15 cancer types. Because this analysis shows association rather than direction, both TRIM39-to-partner and partner-to-TRIM39 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TRIM39→partner) and Y-score (partner→TRIM39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	Negative regulation of RNA export from nucleus →	+0.125	+0.830	<.001	<.001	3	16
STOMACH	Vesicle-mediated transport to the plasma membrane →	+0.075	+0.624	<.001	<.001	3	14
BLOOD_Lymphoma	Establishment of protein localization to organelle →	+0.053	+0.796	<.001	<.001	3	14
BLOOD_Lymphoma	Regulation of proteasomal ubiquitin-dependent protein catabolic process →	+0.044	+0.548	<.001	.001	3	14
SOFT_TISSUE	RNA export from nucleus →	+0.105	+0.612	.001	.002	3	13
BONE	Establishment of protein localization to vacuole →	+0.080	+0.676	.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,612 associations by consensus.

Exploration

TRIM39 survival (RNA) · tumor vs normal (RNA) · all TRIM39 data types