TRIM3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TRIM3 mutation is significantly associated with the total protein of many other genes, with 39 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TRIM3-associated genes across cancer lineages are Caspase-7-cleavedD198, eIF4E, and ACC1. Each is linked with TRIM3 in more than 2 cancer types. Because this analysis shows association rather than direction, both TRIM3-to-partner and partner-to-TRIM3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by TRIM3-low versus TRIM3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRIM3→partner) and Y-score (partner→TRIM3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.796+2.019<.001.00133
UCECeIF4E →+0.210+1.893.001<.00132
UCECACC1 →+0.290+1.713.010.02432
SKCMJNK2 →+0.278+3.169.006.01732
UCECMEK1 →+0.539+2.485<.001<.00132
UCECPDCD4 →-0.560-2.906<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 39 associations by consensus.

Caspase-7-cleavedD198 by TRIM3 expression — UCEC

Box plot of Caspase-7-cleavedD198 in TRIM3-low vs TRIM3-high samples in UCEC.

Explore this box plot interactively →

Exploration