TRDMT1

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TRDMT1 RNA expression is significantly associated with the RNA expression of many other genes, with 21,262 significant associations in total. UVM shows the largest number of these associations.

The most reproducible TRDMT1-associated genes across cancer lineages are USP34, RLF, and EPC1. Each is linked with TRDMT1 in more than 33 cancer types. Because this analysis shows association rather than direction, both TRDMT1-to-partner and partner-to-TRDMT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TRDMT1 versus USP34 in DLBC, with a Pearson correlation of 0.73.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRDMT1→partner) and Y-score (partner→TRDMT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
DLBCUSP34 →+2.376+0.716<.001<.001334
UVMRLF →+1.471+0.860<.001<.001334
UVMEPC1 →+1.123+0.859<.001<.001334
DLBCMED13L →+1.600+0.749<.001<.001334
DLBCCHD6 →+1.193+0.644<.001<.001334
UVMSBNO1 →+1.356+0.777<.001<.001334
Each partner links to its Q-omics profile. Showing the 6 strongest of 21,262 associations by consensus.

TRDMT1 vs USP34 — DLBC

Per-sample scatter of TRDMT1 vs USP34 in DLBC (Pearson r = 0.73).

Explore this scatter interactively →

Exploration