Across TCGA patient cohorts, TRAV6 mutation is significantly associated with the RNA expression of many other genes, with 79 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible TRAV6-associated genes across cancer lineages are OR5L2, RN7SL673P, and LINC00314. Each is linked with TRAV6 in more than 1 cancer types. Because this analysis shows association rather than direction, both TRAV6-to-partner and partner-to-TRAV6 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRAV6→partner) and Y-score (partner→TRAV6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	OR5L2 →	+0.034	+7.930	<.001	.008	3	2
BRCA	RN7SL673P →	+0.159	+8.055	<.001	.007	3	1
CESC	LINC00314 →	+0.079	+5.669	<.001	.003	3	1
CESC	FARSBP1 →	+0.045	+5.669	<.001	.003	3	1
CESC	ANP32BP2 →	+0.080	+5.201	<.001	.007	3	1
BRCA	MIR4495 →	+0.456	+7.731	<.001	.009	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 79 associations by consensus.

Exploration

TRAV6 survival (RNA) · tumor vs normal (RNA) · all TRAV6 data types