Across TCGA patient cohorts, TRAV5 mutation is significantly associated with the RNA expression of many other genes, with 42 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TRAV5-associated genes across cancer lineages are LINC01363, MIR6894, and LINC01318. Each is linked with TRAV5 in more than 1 cancer types. Because this analysis shows association rather than direction, both TRAV5-to-partner and partner-to-TRAV5 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRAV5→partner) and Y-score (partner→TRAV5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	LINC01363 →	+0.100	+3.260	<.001	.002	3	2
UCEC	MIR6894 →	+1.096	+3.496	<.001	.005	3	1
SKCM	LINC01318 →	+0.551	+3.479	<.001	.008	3	1
SKCM	RN7SL754P →	+0.193	+3.828	<.001	<.001	3	1
SKCM	LINC02271 →	+0.067	+3.449	<.001	.002	3	1
SKCM	VN1R18P →	+0.016	+4.408	<.001	.005	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 42 associations by consensus.

Exploration

TRAV5 survival (RNA) · tumor vs normal (RNA) · all TRAV5 data types