TRAPPC6B

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TRAPPC6B RNA expression is significantly associated with the protein abundance of many other proteins, with 18,210 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TRAPPC6B-associated proteins across cancer lineages are FKBP3, MARK3, and CDC42BPB. Each is linked with TRAPPC6B in more than 7 cancer types. Because this analysis shows association rather than direction, both TRAPPC6B-to-partner and partner-to-TRAPPC6B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TRAPPC6B versus FKBP3 in LUAD, with a Pearson correlation of 0.47.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (TRAPPC6B→partner) and Y-score (partner→TRAPPC6B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADFKBP3 →+0.461+0.500<.001<.00138
HNSCMARK3 →+0.256+0.645.001<.00137
BRCACDC42BPB →+0.332+0.734<.001<.00137
COADCEP170B →+0.304+0.450<.001<.00137
GBMBAG5 →+0.284+0.346<.001<.00136
HNSCARHGAP5 →+0.340+0.724<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,210 associations by consensus.

TRAPPC6B vs FKBP3 — LUAD

Per-sample scatter of TRAPPC6B vs FKBP3 in LUAD (Pearson r = 0.47).

Explore this scatter interactively →

Exploration