TRAPPC6B

Across TCGA patient cohorts, TRAPPC6B protein abundance is significantly associated with the RNA expression of many other genes, with 9,734 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible TRAPPC6B-associated genes across cancer lineages are MMS22L, FAM177A1, and RCCD1. Each is linked with TRAPPC6B in more than 3 cancer types. Because this analysis shows association rather than direction, both TRAPPC6B-to-partner and partner-to-TRAPPC6B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TRAPPC6B versus MMS22L in LSCC, with a Pearson correlation of -0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRAPPC6B→partner) and Y-score (partner→TRAPPC6B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	MMS22L →	-0.541	-0.170	.002	<.001	3	4
GBM	FAM177A1 →	+0.432	+0.221	<.001	.001	3	4
BRCA	RCCD1 →	-0.530	-0.206	<.001	<.001	3	4
BRCA	UGT8 →	-1.245	-0.167	.001	.001	3	4
BRCA	COA4 →	-0.429	-0.216	.001	<.001	3	4
LSCC	NR2C2AP →	-0.550	-0.120	.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,734 associations by consensus.

TRAPPC6B vs MMS22L — LSCC

Explore this scatter interactively →