Across TCGA patient cohorts, TRAPPC4 protein abundance is significantly associated with the RNA expression of many other genes, with 6,854 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TRAPPC4-associated genes across cancer lineages are NCF2, PARVG, and TMEM150B. Each is linked with TRAPPC4 in more than 4 cancer types. Because this analysis shows association rather than direction, both TRAPPC4-to-partner and partner-to-TRAPPC4 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRAPPC4→partner) and Y-score (partner→TRAPPC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	NCF2 →	+0.973	+0.184	.006	.001	2	5
LSCC	PARVG →	+0.606	+0.145	.001	<.001	3	4
CCRCC	TMEM150B →	+0.633	+0.124	<.001	.001	3	4
HNSC	SPI1 →	+0.668	+0.129	<.001	<.001	3	4
HNSC	ABI3 →	+0.810	+0.148	<.001	<.001	3	3
HNSC	CCRL2 →	+0.570	+0.113	<.001	.002	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,854 associations by consensus.

Exploration

TRAPPC4 survival (RNA) · tumor vs normal (RNA) · all TRAPPC4 data types