TRAPPC2B

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TRAPPC2B RNA expression is significantly associated with the protein abundance of many other proteins, with 12,566 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible TRAPPC2B-associated proteins across cancer lineages are TKT, PRR12, and CHMP2A. Each is linked with TRAPPC2B in more than 3 cancer types. Because this analysis shows association rather than direction, both TRAPPC2B-to-partner and partner-to-TRAPPC2B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TRAPPC2B versus TKT in OV, with a Pearson correlation of -0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (TRAPPC2B→partner) and Y-score (partner→TRAPPC2B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVTKT →-0.399-0.415.002.00434
BRCAPRR12 →+0.272+0.515.003<.00134
BRCACHMP2A →+0.468+0.422<.001<.00134
LUADSEC24C →-0.161-0.308.001.00234
BRCASND1 →-0.272-0.443<.001<.00134
CCRCCEPM2AIP1 →+0.391+0.370<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,566 associations by consensus.

TRAPPC2B vs TKT — OV

Per-sample scatter of TRAPPC2B vs TKT in OV (Pearson r = -0.36).

Explore this scatter interactively →

Exploration