TRAK1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, TRAK1 RNA differs between tumor and matched normal tissue in 14 of 18 cancer types tested, making tumor–normal expression one of TRAK1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where TRAK1 RNA is repressed in tumor relative to normal tissue. In most cancer types TRAK1 is over-expressed in tumor, although a few such as KIRC and COAD show the opposite, repressed pattern.

KIRC, COAD, and LIHC are the cancer types where TRAK1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in TRAK1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCMaleII,III,IV−0.780<.0017view →
COADFemaleIV−1.140.0016view →
LIHCFemaleII,III,IV+1.055<.0016view →
CHOLMaleAll+1.790<.0015view →
STADMaleAll+0.742.0034view →
HNSCAllAll−0.381.0054view →
THCAAllAll−0.304.0024view →
BRCAFemaleII,III,IV−0.293<.0014view →
KICHAllAll+0.406.0083view →
PAADAllAll+0.757.0192view →
UCECAllIII,IV+0.676.0252view →
LUADFemaleAll−0.375.0052view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 14 lineages.

TRAK1–KIRC

Tumor-vs-normal expression box plot for TRAK1 RNA in KIRC.

Open the KIRC breakdown →

Exploration