TPTE2P2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TPTE2P2 mutation is significantly associated with the RNA expression of many other genes, with 434 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TPTE2P2-associated genes across cancer lineages are NDUFAF5, PIGU, and NKAP. Each is linked with TPTE2P2 in more than 1 cancer types. Because this analysis shows association rather than direction, both TPTE2P2-to-partner and partner-to-TPTE2P2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NDUFAF5 grouped by TPTE2P2-low versus TPTE2P2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TPTE2P2→partner) and Y-score (partner→TPTE2P2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNDUFAF5 →+0.565+3.397<.001.00431
UCECPIGU →+0.499+3.364.004.00531
UCECNKAP →+0.509+3.332.003.00531
UCECHMOX2 →+0.541+3.343.001.00531
UCECUBXN8 →+0.677+3.332.005.00531
UCECLSM5 →+0.585+3.386.007.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 434 associations by consensus.

NDUFAF5 by TPTE2P2 expression — UCEC

Box plot of NDUFAF5 in TPTE2P2-low vs TPTE2P2-high samples in UCEC.

Explore this box plot interactively →

Exploration