TNFSF14

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TNFSF14 mutation is significantly associated with the RNA expression of many other genes, with 5 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible TNFSF14-associated genes across cancer lineages are USP29, WFDC6, and C6orf118. Each is linked with TNFSF14 in more than 1 cancer types. Because this analysis shows association rather than direction, both TNFSF14-to-partner and partner-to-TNFSF14 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, USP29 grouped by TNFSF14-low versus TNFSF14-high in OESOPHAGUS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TNFSF14→partner) and Y-score (partner→TNFSF14) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSUSP29 →+0.006+4.906<.001.00631
LUNG_NSCLC_LUADWFDC6 →+0.036+4.887.002.00931
LARGE_INTESTINEC6orf118 →+0.130+3.793<.001.00731
LARGE_INTESTINECOX6A2 →+0.082+4.437<.001.00431
LARGE_INTESTINEBPIFB6 →+0.020+4.437<.001.00431
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

USP29 by TNFSF14 expression — OESOPHAGUS

Box plot of USP29 in TNFSF14-low vs TNFSF14-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration