TNFRSF9

RNA expression — cross-omics
Cross-omicsRNA → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TNFRSF9 RNA expression is significantly associated with the RNA expression of many other genes, with 9,001 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible TNFRSF9-associated genes across cancer lineages are TNFAIP3, IL32, and ITGA5. Each is linked with TNFRSF9 in more than 11 cancer types. Because this analysis shows association rather than direction, both TNFRSF9-to-partner and partner-to-TNFRSF9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TNFRSF9 versus TNFAIP3 in BREAST, with a Pearson correlation of 0.57.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TNFRSF9→partner) and Y-score (partner→TNFRSF9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTTNFAIP3 →+2.930+0.767<.001<.001311
BLOOD_LymphomaIL32 →+4.574+1.685<.001<.001311
BREASTITGA5 →+3.525+0.694<.001.001211
UPPER_AERODIGESTIVE_TRACTCSF2 →+1.991+1.443.001<.001310
LIVERTNIP1 →+1.318+1.111.004.002112
LIVERDUSP10 →+2.606+1.736<.001.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,001 associations by consensus.

TNFRSF9 vs TNFAIP3 — BREAST

Per-sample scatter of TNFRSF9 vs TNFAIP3 in BREAST (Pearson r = 0.57).

Explore this scatter interactively →

Exploration