TNFRSF4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TNFRSF4 mutation is significantly associated with the total protein of many other genes, with 3 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TNFRSF4-associated genes across cancer lineages are PDK1_pS241, AMPK_pT172, and p70-S6K. Each is linked with TNFRSF4 in more than 1 cancer types. Because this analysis shows association rather than direction, both TNFRSF4-to-partner and partner-to-TNFRSF4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TNFRSF4→partner) and Y-score (partner→TNFRSF4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPDK1_pS241 →+0.259+2.820.013.03631
UCECAMPK_pT172 →+0.521+2.820.038.03631
UCECp70-S6K →+0.251+2.833.033.03511
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

Exploration