TNFRSF1B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TNFRSF1B mutation is significantly associated with the RNA expression of many other genes, with 717 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TNFRSF1B-associated genes across cancer lineages are RNU6-1261P, RN7SL835P, and MTCO1P46. Each is linked with TNFRSF1B in more than 1 cancer types. Because this analysis shows association rather than direction, both TNFRSF1B-to-partner and partner-to-TNFRSF1B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-1261P grouped by TNFRSF1B-low versus TNFRSF1B-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TNFRSF1B→partner) and Y-score (partner→TNFRSF1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCARNU6-1261P →+0.301+4.859<.001.00432
BLCARN7SL835P →+0.253+3.959.003.00632
SKCMMTCO1P46 →+0.030+3.141.005.00632
COADRNU6-709P →+0.742+6.142<.001<.00132
BLCARN7SL51P →+0.389+6.329<.001<.00132
CESCGAPDHP56 →+0.028+5.569<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 717 associations by consensus.

RNU6-1261P by TNFRSF1B expression — BLCA

Box plot of RNU6-1261P in TNFRSF1B-low vs TNFRSF1B-high samples in BLCA.

Explore this box plot interactively →

Exploration