TMPRSS6

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMPRSS6 mutation is significantly associated with the RNA expression of many other genes, with 1,645 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TMPRSS6-associated genes across cancer lineages are ZWINT, RNA5SP256, and CHAF1A. Each is linked with TMPRSS6 in more than 3 cancer types. Because this analysis shows association rather than direction, both TMPRSS6-to-partner and partner-to-TMPRSS6 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMPRSS6→partner) and Y-score (partner→TMPRSS6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECZWINT →+0.598+2.197.005.00934
CESCRNA5SP256 →+0.313+4.060.001.00433
UCECCHAF1A →+0.487+2.700.004.00633
UCECALDH18A1 →+0.398+3.617.009.00133
SKCMHELLS →+0.549+3.472.001.00233
SKCMGOT1 →+0.402+2.201.004.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,645 associations by consensus.

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